Difference between revisions of "Biocluster Applications"

From Carl R. Woese Institute for Genomic Biology - University of Illinois Urbana-Champaign
Jump to navigation Jump to search
Line 4: Line 4:
 
!Installed Versions
 
!Installed Versions
 
!Description
 
!Description
|-
 
|[http://www.open-mpi.org/ OpenMPI]
 
|OpenMPI/2.1.0-GCC-4.9.4-2.28
 
|The Open MPI Project is an open source MPI-2 implementation.
 
|-
 
|[https://github.com/LLNL/ior ior]
 
|ior/3.0.1-IGB-gcc-4.9.4
 
|Parallel filesystem I/O benchmark
 
|-
 
|[http://www.mpich.org/ MPICH]
 
|MPICH/3.0.4-GCC-4.9.4-2.28
 
|MPICH v3.x is an open source high-performance MPI 3.0 implementation.
 
It does not support InfiniBand (use MVAPICH2 with InfiniBand devices).
 
 
|-
 
|-
 
|[http://www.gnu.org/software/gsl/ GSL]
 
|[http://www.gnu.org/software/gsl/ GSL]

Revision as of 09:31, 14 September 2018

Application Installed Versions Description
GSL GSL/2.3-IGB-gcc-4.9.4 The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers.
The library provides a wide range of mathematical routines such as random number generators, special functions
and least-squares fitting. - Homepage: http://www.gnu.org/software/gsl/
cuDNN cuDNN/7.1.4-IGB-gcc-4.9.4-CUDA-9.0.176 The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for
   deep neural networks.
OpenBLAS OpenBLAS/0.2.19-GCC-4.9.4-2.28-LAPACK-3.7.0 OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. - Homepage: http://xianyi.github.com/OpenBLAS/
FFTW FFTW/.3.3.6-gompi-4.9.4 FFTW is a C subroutine library for computing the discrete Fourier transform (DFT)
in one or more dimensions, of arbitrary input size, and of both real and complex data. - Homepage: http://www.fftw.org
ScaLAPACK ScaLAPACK/.2.0.2-gompi-4.9.4-OpenBLAS-0.2.19-LAPACK-3.7.0 The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines
redesigned for distributed memory MIMD parallel computers. - Homepage: http://www.netlib.org/scalapack/