Difference between revisions of "Biocluster Applications"

From Carl R. Woese Institute for Genomic Biology - University of Illinois Urbana-Champaign
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!Description
 
!Description
 
|-
 
|-
|OpenMPI
+
|[http://www.open-mpi.org/ OpenMPI]
 
|OpenMPI/2.1.0-GCC-4.9.4-2.28
 
|OpenMPI/2.1.0-GCC-4.9.4-2.28
 
|The Open MPI Project is an open source MPI-2 implementation.
 
|The Open MPI Project is an open source MPI-2 implementation.
 
|-
 
|-
|ior
+
|[https://github.com/LLNL/ior ior]
 
|ior/3.0.1-IGB-gcc-4.9.4
 
|ior/3.0.1-IGB-gcc-4.9.4
 
|Parallel filesystem I/O benchmark
 
|Parallel filesystem I/O benchmark
 
|-
 
|-
|MPICH
+
|[http://www.mpich.org/ MPICH]
 
|MPICH/3.0.4-GCC-4.9.4-2.28
 
|MPICH/3.0.4-GCC-4.9.4-2.28
 
|MPICH v3.x is an open source high-performance MPI 3.0 implementation.
 
|MPICH v3.x is an open source high-performance MPI 3.0 implementation.
 
It does not support InfiniBand (use MVAPICH2 with InfiniBand devices).
 
It does not support InfiniBand (use MVAPICH2 with InfiniBand devices).
 
|}
 
|}

Revision as of 09:05, 14 September 2018

Application Installed Versions Description
OpenMPI OpenMPI/2.1.0-GCC-4.9.4-2.28 The Open MPI Project is an open source MPI-2 implementation.
ior ior/3.0.1-IGB-gcc-4.9.4 Parallel filesystem I/O benchmark
MPICH MPICH/3.0.4-GCC-4.9.4-2.28 MPICH v3.x is an open source high-performance MPI 3.0 implementation.

It does not support InfiniBand (use MVAPICH2 with InfiniBand devices).