Using Bioarchive
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Contents
Request An Account[edit]
Change Password[edit]
Get S3 Keys[edit]
Option A - Get a Biocluster Account[edit]
The tools to access the archive are already installed on Biocluster. To get an account on Biocluster please fill out the form at https://www.igb.illinois.edu/content/biocluster-account-form
Option B - Install Eon Browser[edit]
You can download and install the Eon Browser GUI for the archive on your local system by downloading the software at https://developer.spectralogic.com/clients/
Option C - Install Command Line Tools[edit]
Using Eon Browser[edit]
Using Command Line Tools[edit]
Upload A Directory[edit]
ds3_java_cli -a S3_Access_ID -k S3_Secret_Key -b Bucket_Name -e bioarchive.igb.illinois.edu --insecure -c put_bulk -d Directory_Name
- S3_Access_ID is the S3 access id for your account, you can get this by logging into the archive web interface
- S3_Secret_Key is the S3 secret key for your account, you can get this by logging into the archive web interface
- Bucket_Name is the S3 bucket you want to put your data in
- bioarchive.igb.illinois.edu is the dns name of the archive. If you are using in biocluster, you should use 172.16.28.54 instead
- insecure does not check the certificate of the service
- put_bulks tells the program to upload everything inside the directory given
- Directory_Name is the directory to upload, note this will upload everything in this directory, not the directory itself
